Difference between revisions of "Supported Beta-diversity Measures"

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(New page: * Bray-Curtis (aka: normalized weighted UniFrac, Sorensen, Steinhaus, Odum, percentage difference, pairwise Whittaker) * Canberra * Chi-squared * Coefficient of similarity * Complete tree ...)
 
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Quantitative measures:
 +
* Bray-Curtis (aka: normalized weighted UniFrac, Sorensen, Steinhaus, Odum, percentage difference, pairwise Whittaker)
 +
* Canberra
 +
* Chi-squared
 +
* Coefficient of similarity
 +
* Complete tree
 +
* Euclidean
 +
* Fst
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* Gower
 +
* Hellinger
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* Kulczynski (aka: Kulczynski-Cody, Sokal-Sneath)
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* Lennon compositional difference
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* Manhattan (aka: taxicab, city-block, unnormalized weighted UniFrac)
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* Mean nearest neighbour distance (aka: comdistnn)
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* Mean phylogenetic distance (aka: comdist)
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* Morisita-Horn
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* Pearson product-moment correlation coefficient
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* Rao's Hp
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* Soergel (aka: Jaccard, unweighted UniFrac, Ruzicka, Marczewski-Steinhaus, percentage remoteness)
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* Species profile
 +
* Tamas coefficient (TC) (aka: simple matching coefficient)
 +
* Whittaker index of association
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* Yue-Clayton (aka: similarity ratio)
 +
 +
Qualitative measures:
 
* Bray-Curtis (aka: normalized weighted UniFrac, Sorensen, Steinhaus, Odum, percentage difference, pairwise Whittaker)
 
* Bray-Curtis (aka: normalized weighted UniFrac, Sorensen, Steinhaus, Odum, percentage difference, pairwise Whittaker)
 
* Canberra
 
* Canberra

Revision as of 13:36, 8 June 2012

Quantitative measures:

  • Bray-Curtis (aka: normalized weighted UniFrac, Sorensen, Steinhaus, Odum, percentage difference, pairwise Whittaker)
  • Canberra
  • Chi-squared
  • Coefficient of similarity
  • Complete tree
  • Euclidean
  • Fst
  • Gower
  • Hellinger
  • Kulczynski (aka: Kulczynski-Cody, Sokal-Sneath)
  • Lennon compositional difference
  • Manhattan (aka: taxicab, city-block, unnormalized weighted UniFrac)
  • Mean nearest neighbour distance (aka: comdistnn)
  • Mean phylogenetic distance (aka: comdist)
  • Morisita-Horn
  • Pearson product-moment correlation coefficient
  • Rao's Hp
  • Soergel (aka: Jaccard, unweighted UniFrac, Ruzicka, Marczewski-Steinhaus, percentage remoteness)
  • Species profile
  • Tamas coefficient (TC) (aka: simple matching coefficient)
  • Whittaker index of association
  • Yue-Clayton (aka: similarity ratio)

Qualitative measures:

  • Bray-Curtis (aka: normalized weighted UniFrac, Sorensen, Steinhaus, Odum, percentage difference, pairwise Whittaker)
  • Canberra
  • Chi-squared
  • Coefficient of similarity
  • Complete tree
  • Euclidean
  • Fst
  • Gower
  • Hellinger
  • Kulczynski (aka: Kulczynski-Cody, Sokal-Sneath)
  • Lennon compositional difference
  • Manhattan (aka: taxicab, city-block, unnormalized weighted UniFrac)
  • Mean nearest neighbour distance (aka: comdistnn)
  • Mean phylogenetic distance (aka: comdist)
  • Morisita-Horn
  • Pearson product-moment correlation coefficient
  • Rao's Hp
  • Soergel (aka: Jaccard, unweighted UniFrac, Ruzicka, Marczewski-Steinhaus, percentage remoteness)
  • Species profile
  • Tamas coefficient (TC) (aka: simple matching coefficient)
  • Whittaker index of association
  • Yue-Clayton (aka: similarity ratio)