Difference between revisions of "EBD version history"

From Bioinformatics Software
Jump to: navigation, search
Line 1: Line 1:
 +
Oct. 7, 2014: EBD v1.0.6 release. Improved support for taxon-based beta diversity calculators. Fixed compiler errors under GCC >= 4.6.8.
 +
June 27, 2014: EBD v1.0.5 release. Improved support for parsing Newick trees with missing branch length information.
 +
=== 1.0.6 (Oct. 7, 2014) ===
 +
 +
* Added support to produce jackknife values.
 +
* Added automatic pruning of input trees to sequences in OTU table.
 +
* Added automatic generation of hierarchical cluster trees.
 +
* Minor improvements to program output.
 +
 +
=== 1.0.5 (June 27, 2014) ===
 +
 +
* Improved support for parsing Newick trees with missing branch length information.
 +
* [https://github.com/dparks1134/ExpressBetaDiversity/releases GitHub Release]
 +
 
=== 1.0.4 (May 24, 2013) ===
 
=== 1.0.4 (May 24, 2013) ===
  

Revision as of 22:21, 6 October 2014

Oct. 7, 2014: EBD v1.0.6 release. Improved support for taxon-based beta diversity calculators. Fixed compiler errors under GCC >= 4.6.8. June 27, 2014: EBD v1.0.5 release. Improved support for parsing Newick trees with missing branch length information.

Contents

1.0.6 (Oct. 7, 2014)

  • Added support to produce jackknife values.
  • Added automatic pruning of input trees to sequences in OTU table.
  • Added automatic generation of hierarchical cluster trees.
  • Minor improvements to program output.

1.0.5 (June 27, 2014)

  • Improved support for parsing Newick trees with missing branch length information.
  • GitHub Release

1.0.4 (May 24, 2013)

  • Added support to produce jackknife values.
  • Added automatic pruning of input trees to sequences in OTU table.
  • Added automatic generation of hierarchical cluster trees.
  • Minor improvements to program output.
  • EBD v1.0.4 binaries and source code

1.0.3 (Feb. 5, 2013)

1.0.2 (Feb. 1, 2013)

  • Added in the program ClusterTree. ClusterTree can generate NJ, UPGMA, single linkage, or complete linkage hierarchical cluster trees from the dissimilarity matrices produced by EBD.
  • Added a Python script for converting UniFrac formatted sample data into the format required by EBD.
  • EBD v1.0.2 binaries and source code

1.0.1 (June 8, 2012)

1.0.0 (Feb. 1, 2012)