Difference between revisions of "EBD version history"

From Bioinformatics Software
Jump to: navigation, search
(1.0.3 (May 24, 2013))
Line 5: Line 5:
 
* Added automatic generation of hierarchical cluster trees.
 
* Added automatic generation of hierarchical cluster trees.
 
* Minor improvements to program output.
 
* Minor improvements to program output.
 +
* [[Media:EBD_1_0_4.zip|EBD v1.0.4 binaries and source code]]
  
 
=== 1.0.3 (Feb. 5, 2013) ===
 
=== 1.0.3 (Feb. 5, 2013) ===
  
 
* Added functionality to project (prune) a tree to a specific set of taxa.
 
* Added functionality to project (prune) a tree to a specific set of taxa.
 +
* [[Media:EBD_1_0_3.zip|EBD v1.0.3 binaries and source code]]
  
 
=== 1.0.2 (Feb. 1, 2013) ===
 
=== 1.0.2 (Feb. 1, 2013) ===
Line 14: Line 16:
 
* Added in the program ClusterTree. ClusterTree can generate NJ, UPGMA, single linkage, or complete linkage hierarchical cluster trees from the dissimilarity matrices produced by EBD.
 
* Added in the program ClusterTree. ClusterTree can generate NJ, UPGMA, single linkage, or complete linkage hierarchical cluster trees from the dissimilarity matrices produced by EBD.
 
* Added a Python script for converting UniFrac formatted sample data into the format required by EBD.
 
* Added a Python script for converting UniFrac formatted sample data into the format required by EBD.
 +
* [[Media:EBD_1_0_2.zip|EBD v1.0.2 binaries and source code]]
  
 
=== 1.0.1 (June 8, 2012) ===
 
=== 1.0.1 (June 8, 2012) ===

Revision as of 04:31, 3 June 2013

Contents

1.0.4 (May 24, 2013)

  • Added support to produce jackknife values.
  • Added automatic pruning of input trees to sequences in OTU table.
  • Added automatic generation of hierarchical cluster trees.
  • Minor improvements to program output.
  • EBD v1.0.4 binaries and source code

1.0.3 (Feb. 5, 2013)

1.0.2 (Feb. 1, 2013)

  • Added in the program ClusterTree. ClusterTree can generate NJ, UPGMA, single linkage, or complete linkage hierarchical cluster trees from the dissimilarity matrices produced by EBD.
  • Added a Python script for converting UniFrac formatted sample data into the format required by EBD.
  • EBD v1.0.2 binaries and source code

1.0.1 (June 8, 2012)

  • Added check to ensure only valid weighted and unweighted measures can be computed.

1.0.0 (Feb. 1, 2012)